Recently in Assault on Science Category

Via John Pieret’s excellent Thoughts in a Haystack blog I learn of an ongoing controversy about the teaching of evolution at Adventist Universities. (See also this Sept. 1 article from Inside Higher Ed.) The latest event is that the board of trustess of La Sierra University in Riverside, California, voted to endorse young-earth creationism:

La Sierra’s board of trustees last week unanimously voted to endorse Adventist beliefs that the world was created in six 24-hour days and said the teaching of evolution must be “within the context of the Adventist belief regarding creation.”

The board also proposed that all 15 North American Adventist universities develop a curriculum that includes a “scientifically rigorous affirmation” of Adventist creation beliefs.

At first glance, it is confusing that this is news. Those of us who are familiar with the history of creationism and have read Ronald Numbers’ classic The Creationists, and learned that the Seventh-Day Adventists were virtually the only fundamentalists who produced major advocates supporting belief in a young earth and global flood in the early 20th century – based on the literalist visions of Adventist founder and prophetess Ellen White. It was only in the 1960s that the young-earth/global view became dominant within American fundamentalism/conservative evangelicalism in general, primarily through the efforts of Henry Morris and John Whitcomb in The Genesis Flood.

For some reason or other I got on the email list of Ray Comfort’s mailing list. What can I say, I am a connoisseur of the weird. As I’ve learned a little bit about Comfort’s ministry, I have been beginning to wonder – is this whole “Darwin giveaway” thing actually going to happen? Or is it mostly imaginary – primarily a fundraising stunt? I have seen lots of evidence that Comfort et al. are good at publicity and producing videos – but no evidence that they are strong on the ground. If they were actually organized to distribute hundreds of thousands of books on hundreds of campuses, I kind of think there would be more evidence of that organization. But there is virtually no such evidence, despite there being plenty of fundamentalist student groups on campuses that might serve as the foot soldiers for this sort of thing.

Here’s the latest odd thing along these lines –

PRESS RELEASE - 5 of 7 - Militant Atheists Seek Details

Militant Atheists Seek Details of Darwin Book Giveaway

When 170,000 copies of Charles Darwin’s On the Origin of Species with Ray Comfort’s Introduction are given away at universities around the country, atheists plan to be waiting for them. But they don’t know the identity of the universities the books will be given out. Comfort said. “The reason atheists are finding nothing is because every school that is being visited is a closely guarded secret. We don’t want to cause a disturbance. We simply want to get books into the hands of students across the country.” Others advised those who see the books being handed out said, “Cut out the intro in front of them, leave it on the table and take the book.” Another said, “Get them to sign [the] book, thank them, and then make some devastating point that will shatter them forever.” See http://www.livingwaters.com/origin “Press kit” for textual, audio, and video sound bites.

What? The list of schools being visited is a closely-guarded secret? Then why what it on their website at one point (if I recall correctly – here’s a copy from September), and why did they proudly announce in the original video that the top 50 American universities would be targeted? In that video, they also said they were working with Campus Crusade, Answers in Genesis, and the Alliance Defense Fund – but I haven’t heard anything about the Origin-into-schools project from those groups.

Anyway, it doesn’t make much sense and I don’t have any firsthand information, but at the moment I’m wondering if this Origin-into-schools thing will poke above the background noise of random crazies who hand out stuff on the quads of college campuses every day. (You can be sure, though, that there will be one place with Ray Comfort and his camera crew, since in some arenas, a video is worth more than 1,000,000 words and 1,000 on-the-ground volunteers.)

I’ve received a letter from Iowa written by Dr. Hector Avalos, which, I think, may be of interest to many readers of this blog. In his letter Dr. Avalos reports about a defeat of ID advocates in one of the school boards in Iowa. The full text of Dr. Avalos’s letter can be seen here. I hope most of the PT’s denizens will join me in expressing our gratitude to Dr. Avalos for his letter.

Don’t Diss Darwin

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As everyone in the science blogosphere knows by now, banana man Ray Comfort, he who cannot understand sex, is planning to distribute on the order of 170,000 (his claim) copies of Darwin’s On the Origin of Species in late November on various U.S. and Canadian university campuses. The book is prefaced by an introduction (2 Meg PDF) by Ray that contains the standard creationist argle bargle.

NCSE has created a page in response called Don’t Diss Darwin that has a variety of resources and suggestions. It has an appropriate flier, posters, and a lovely banana bookmark ready for downloading.

Most important for our immediate purposes, it contains a list of universities currently targeted. That list is reproduced below the fold. (I note that Lehigh is on the list; I wonder if Michael Behe will avail himself of the opportunity to learn some evolution.)

I urge scientists and interested folks on the infected campuses to seek immunization from the NCSE page.

Hat tip to Florida Citizens for Science.

The Education Life supplement of last Sunday’s New York Times contained a little blurb that claimed college students who majored in the humanities and social sciences were apt to become less religiously observant after college. According to the Times, you may credit or blame postmodernism because it stresses that truth is relative rather than absolute. Small solace, as far as I am concerned.

I was just catching up on a few blogs, and noticed all this stuff I missed about Jonathan Wells' visit to Oklahoma. And then I read Wells' version of the event, and just about choked on my sweet mint tea.

The next person--apparently a professor of developmental biology--objected that the film ignored facts showing the unity of life, especially the universality of the genetic code, the remarkable similarity of about 500 housekeeping genes in all living things, the role of HOX genes in building animal body plans, and the similarity of HOX genes in all animal phyla, including sponges. 1Steve began by pointing out that the genetic code is not universal, but the questioner loudly complained that 2he was not answering her questions. I stepped up and pointed out that housekeeping genes are similar in all living things because without them life is not possible. I acknowledged that HOX gene mutations can be quite dramatic (causing a fly to sprout legs from its head in place of antennae, for example), but 3HOX genes become active midway through development, 4long after the body plan is already established. 5They are also remarkably non-specific; for example, if a fly lacks a particular HOX gene and a comparable mouse HOX gene is inserted in its place, the fly develops normal fly parts, not mouse parts. Furthermore, 6the similarity of HOX genes in so many animal phyla is actually a problem for neo-Darwinism: 7If evolutionary changes in body plans are due to changes in genes, and flies have HOX genes similar to those in a horse, why is a fly not a horse? Finally, 8the presence of HOX genes in sponges (which, everyone agrees, appeared in the pre-Cambrian) still leaves unanswered the question of how such complex specified genes evolved in the first place.

The questioner became agitated and shouted out something to the effect that HOX gene duplication explained the increase in information needed for the diversification of animal body plans. 9I replied that duplicating a gene doesn't increase information content any more than photocopying a paper increases its information content. She obviously wanted to continue the argument, but the moderator took the microphone to someone else.

It blows my mind, man, it blows my freakin' mind. How can this guy really be this stupid? He has a Ph.D. from UC Berkeley in developmental biology, and he either really doesn't understand basic ideas in the field, or he's maliciously misrepresenting them…he's lying to the audience. He's describing how he so adroitly fielded questions from the audience, including this one from a professor of developmental biology, who was no doubt agitated by the fact that Wells was feeding the audience steaming balls of rancid horsepuckey. I can't blame her. That was an awesomely dishonest/ignorant performance, and Wells is proud of himself. People should be angry at that fraud.

An egregiously stupid remark by an IDiot (redux)

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We have a twofer! In his account of his visit with Stephen Meyer to Norman, Oklahoma, a couple of weeks ago, Jonathan Wells made another totally stupid remark just following the one for which he got an earlier award. This one contains a deceptive analogy that the ID creationists have grown fond of lately. Recall that their recent mantra has been ‘evolution can’t increase “biological” information.’ That’s the shorthand gloss of Dembski’s so-called Law of Conservation of Information.

In the Q&A Wells ‘explained’ to a questioner that HOX genes are remarkably non-specific, and burped up the egregiously stupid remark for which he got the earlier award:

If evolutionary changes in body plans are due to changes in genes, and flies have HOX genes similar to those in a horse, why is a fly not a horse?

To win his second award, Wells went on to write another truly dumb thing.

IDiots can’t read.

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This is discussed in an earlier comment thread but I thought I’d promote it. The Disco ‘Tute is in a swivet over the California Science Center’s cancellation of a showing of Darwin’s Dilemma, the latest excretion of Illustrata Media, producer of the late unlamented Expelled: No Intelligence Allowed (at the Disco ‘Tute). Disco Dancer Robert Crowther, of course, attributes the cancellation to the machinations of the Loyal Order of Dogmatic Darwin Conspirators. However, Doc Bill of antievolution.org has the story. In its glee about the showing, the ‘Tuters issued a press release that strongly implied that the Science Center and Smithsonian are somehow involved in the film’s premiere.

Now, there may be some question about whether the press release actually violated the Science Center’s contract with the ostensible sponsor of the showing, the American Freedom Alliance – IANAL, and don’t know the connection, if any, between AFA and the Disco ‘Tute. However, the first sentence of the Disco ‘Tute’s press release says

The debate over Darwin will come to California on October 25th, when the Smithsonian Institution’s west coast affiliate premieres Darwin’s Dilemma: The Mystery of the Cambrian Fossil Record, a new intelligent design film which challenges Darwinian evolution.

That plainly says it’s the Smithsonian that’s doing the premiering. And that’s flatly false. It’s the institutional version of inflationary credentialism, one of the hallmarks of pseudoscience. Note that the press release also identifies Stephen Meyer as a scientist, more inflationary credentialism.

Hat tip to Abbie.

Egregiously stupid remark of the week by an IDiot

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It was a tough call given Casey Luskin’s stupidity about Ardipithecus, but we have a winner. In an account of Stephen Meyer’s talk at the University of Oklahoma last week, Jonathan Wells wrote

Furthermore, the similarity of HOX genes in so many animal phyla is actually a problem for neo-Darwinism: If evolutionary changes in body plans are due to changes in genes, and flies have HOX genes similar to those in a horse, why is a fly not a horse?

Hat tip to John Pieret.

langseth.jpg (Photo courtesy LDEO)

September 29th, 2009 Project UPDATE

Courtesy the University of Oregon, which reports on Sept. 22nd that

After 30 days at sea and 16 days of successful seismic surveying of deep-sea hydrothermal ecosystems on the Pacific Ocean floor off British Columbia, researchers from two Northwest institutions have returned to dry land. Their mission to study the deep crustal structure of the Endeavour segment of the Juan de Fuca ridge had drawn last-minute opposition by environmental groups, who in court filings had sought to stop the seismic surveying because of potential harm to whales and other mammals. A portion of the ridge includes the Endeavour Marine Protected Area that was established to foster conservation and responsible scientific study. Canadian courts rejected the groups’ cases. Prior to sailing, the project – the Endeavour Seismic Tomography Experiment – underwent a thorough environmental assessment by Canadian and U.S. regulators. The timing of the expedition was chosen to minimize marine mammal encounters. During the survey, certified marine mammal observers monitored the region on a 24-hour per-day basis. “Not a single marine mammal was either visually observed or acoustically detected during the seismic survey,” said Doug Toomey, professor of geological sciences at the University of Oregon and principal investigator of the National Science Foundation-funded project that was done from the research vessel Marcus G. Langseth.

Update continues below the fold…

With all the hagiography going on for conservative “intellectual” Irving Kristol, who died on September 18, let’s not forget one of his many idiotic statements: that Darwinism is on the way out because it “is really no longer accepted so easily by [many] biologists and scientists.”

As Glenn Morton has exhaustively shown, the trope that “more and more scientists doubt evolution” is one of the oldest falsehoods in creationism. But then, Kristol believed that not all truths were suitable for all people, an echo of Martin Luther’s view that lying for his god was acceptable.

Anti-evolution idiocy seemingly ran in the family. In 1959, Kristol’s wife Gertrude Himmelfarb wrote a terrible book, Darwin and the Darwinian Revolution, demonstrating a lack of understanding of biology and a warped view of Darwin’s influence. One perceptive reviewer penned that Himmelfarb had “an advanced case of Darwinitis, a complaint that afflicts those of a literary bent and strong attachments to pre-scientific culture, who find in the theory of evolution a disturbing and mysterious challenge to their values”. Kristol wrote a favorable review of Himmelfarb’s book for Encounter, without bothering to mention that he was Himmelfarb’s husband. So much for Kristol’s ethics.

Read more at Recursivity

Rationality Now’s tour of Ham’s “museum”

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To add to the various accounts of tours of Ken Ham’s creationism museum, Rationality Now has an excellent series of six posts starting here The posts are particularly noteworthy for the excellent photographs, and I commend them to your attention. The last two paragraphs of the last post are quoteworthy. Referring to children with their families he saw in the museum, Dan writes:

Some of those kids will be stuck in that world for their entire lives. They’ll be raised that way and protected from any alternate viewpoints or ideas. They’ll be shuttered away from any kind of real, intellectually challenging science. They’ll be constantly given misleading or incorrect information about our world. Their parents will steep them in dogma, ritual, and ancient scripture for as long as they can manage… and the Creation Museum will be right there to back them up with pretty lights, bells, and whistles.

The museum is loathsome and its creators should be very, very ashamed.

But they aren’t, of course.

Hat tip to the Friendly Atheist.

Another smackdown of Dembski & Marks

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As most readers know, William Dembski and Robert Marks recently published a paper in an IEEE journal that purports to show that

In critiquing his [Dawkins’] example and arguing that information is not created by unguided evolutionary processes, we are indeed making an argument that supports ID.

Various science bloggers have critiqued it; see here, here, and here for examples.

Now the Metropolis Sampler has published a more technical analysis of the paper, concluding that

The fundamental lesson here is that the Dembski-Marks approach to evaluating model assumptions is both arbitrary and a poor reflection of scientific reasoning. Model assumptions are not accepted or rejected based on a numerical measure of how many logical possibilities that are ruled out or how far probability distributions deviate from uniform measures. Rather, model assumptions are accepted or rejected based on predictive and descriptive accuracy, domain of applicability, ability to unify existing models and empirical knowledge, and so on.

ID creationists persistently use models that misrepresent theories (or in the case of the WEASEL hoorah, misrepresent what the model is intended to represent), and then conclude (on the basis of syntactic manipulations of the model) that the theories are invalid. Dembski, of course, is a serial offender in this respect, and it’s a pity that he’s inveigled Marks into sharing his delusions.

Most have by now heard about the kerfuffle over Bloggingheads.tv hosting creationists. As a consequence, four of the most prominent science bloggers, physicist Sean Carroll, science writer Carl Zimmer, Bad Astronomer Phil Plait, and Pharyngula’s PZ Myers, have elected to not participate further on Bloggingheads. There are comment threads attached to each of the posts linked, with some split in the comments concerning whether the decisions to withdraw are well advised. I myself think they are well advised to withdraw, and I describe why I think that below the fold.

In addition, the Disco ‘Tute’s Bruce Chapman has weighed in, his post invoking the metaphor of the guillotine to describe Blogginghead’s fate.

You will recall that in June John Freshwater filed a federal suit (see PT post here) against the Mt. Vernon City School District, several Board members, several administrators, and a bunch of John and Jane Does. Included among the defendants was David Millstone, attorney for the Board.

Now, according to news reports, Millstone has moved to be dropped as a defendant, arguing that it is improper to sue an attorney in order to pressure the attorney’s client. The news report describes a June 9, 2009, letter from R. Kelly Hamilton to the Board of Education that apparently suggested a settlement, including this sentence: “It will be interesting to observe the developments between Mr. Millstone’s representation and the interests of the Mount Vernon City School System.” According to the news report, Millstone’s filing characterized that sentence as “a ‘veiled threat’ to force Millstone out of representing the school board.”

The news report quotes Millstone’s attorney as saying “The claim against Mr. Millstone appears to be a pressure tactic aimed at the administrative process to terminate Mr. Freshwater’s contract.”

This is of a piece with Freshwater’s basic strategy, which is apparently to attempt to force a settlement one way or another. Freshwater’s pastor, Don Matolyak, has been making noises about settlement for some time now, always, of course, on Freshwater’s terms.

In other legal news, responses to Freshwater’s application to the Ohio Supreme Court for a writ of mandamus to compel testimony from Board members are coming in. They’re linked from here. The administrative hearing was due to resume September 10, but I strongly doubt it’ll happen that soon.

As everybody should be aware by now, Denyse O’Leary is offering a prize for the original code for Dawkins’ Weasel program which illustrates cumulative selection [1]. O’Leary’s offer arises from people challenging Dembski’s misrepresentation of the Weasel program, as he has misrepresented it yet again in a trivial non-id paper. To get some much needed perspective, read Joe Felsenstein’s excellent article (and its follow-up) and those of Chris Mark Chu Carroll (here and here)

Seriously, arguing over whether Dawkins “weasel” program implements locking is a bit like arguing over whether the measuring cylinder in the Measuring Cylinder/Tap model of drug clearance is emptied by a tube or a bloke with a cup. Both are simplified systems that make demonstrating a concept easy, and do much the same thing.

The point is that a leading light of the cdesignproponentsits has spent an enormous amount of time critiquing a toy demonstration of selection, and can’t even get the toy example right. Not only that, they can’t admit when they were wrong. Heck, no one in the cdesign proponetsists can admit Dembski is wrong about a toy program, even when presented with video evidence.

Let’s emphasise this again. It’s a non-issue except for the way it highlights the determined cluelessness of cdesign proponetsists. To use the metaphor of the Measuring Cylinder/Tap model of drug clearance again, Dembski is effectively arguing that Dawkins said the measuring cylinder is emptied by a man with a cup in his book, but anyone can go to Dawkins original book, read how he set it up, and understand that Dawkins specified a tube. Dawkins doesn’t specify how big the tube, or the flow rate of the tap, but it’s sort of obvious and you can easily make an analogous system which demonstrates the same things that Dawkins does. Everyone understands except Dembski who then makes a convoluted argument over the whole thing (see www.evoinfo.org and read their “explanation” of Dawkins program if you have a spare half-hour of your life you don’t mind wasting).

Now there is a video showing a measuring cylinder with a tube (metaphorically, see www.youtube.com/watch?v=5sUQIpFajsg (go to 6:15) for the real video showing the weasel program), Dembski goes “oh, Dawkins must have REALLY have used a cup in his book, then swapped to a tube for the video”. Aside from the convoluted mentality involved in this staggering piece of “reasoning”, it goes to the heart of the cdesign proponentists reliability.

When Dembski claims that Lenski et al., have “smuggled in information”, explaining why they are wrong can get quite technical, but when they claim Dawkins has “smuggled in information”, one can simply point to how deeply they have misunderstood Dawkins model, and if they can’t get Dawkins right (after being told repeatedly, having it explicitly demonstrated to them and being shown a video), what hope is there that they got Lenski right.

For more information on Dembski’s denial of the video evidence, see Dembski Weasels Out, for a wide compendium of Weasel programs old and new, including head to head comparisons of Dawkins version vs Demski’s locking version see Weasels on Parade (note it took over 23 days for the Uncommon Descent people to come up with any programs themselves). To see where I completely reconstruct the output shown in Dawkins book, see here.

[1] Why doesn’t O’Leary just ask Dawkins? The whole concept of running a competition to get Dawkins code instead of asking Dawkins is rather bizarre. While he may not have the original code, he can tell her how he did it.[2] [2] People have asked Dawkins before. It no longer exists. Just like the AppleBasic programs I wrote to calculate stimulation-induced radioactive outflow for our laboratory. Used for years but vanished into the mists of time. Seriously, even if there was a disk around with AppleBasic finding a machine to run it and make copies would be an adventure in itself.

… another shark appears, begging to be jumped.

One of Ray Comfort’s favorite examples of the invalidity of evolution (besides the banana) is sex. A while back Comfort objected to critical remarks about his book by PZ Myers. Comfort is quoted as saying

“Let’s go back even further (100 million years ago) to pre-pre-elephants that also contained males and females. At what point of time in evolutionary history did the female evolve alongside the male? And why did she evolve? Then explain, if you would professor, why horses, giraffes, cattle, zebras, leopards, primates, antelopes, pigs, dogs, sheep, fish, goats, mice, squirrels, whales, chickens, dinosaurs, beavers, cats, human beings and rats also evolved with a female, at some point of time in evolutionary history. Professor, I know you believe, but please, give us who are healthy skeptics some empirical evidence. Remember, stupid people like me want good hard evidence before we, like you, become believers in Darwin’s theory,” Comfort said.

In other words, if evolution is true who were Cain and Abel canoodling with? Erm, sorry about that. Wrong story line. PZ then smacked Ray around in more detail here. Comfort’s remarks are at the level of the old creationist question, “If we evolved from monkeys how come there are still monkeys?”

However, intelligent design, we are told, is not creationism and is a much more sophisticated and ‘scientific’ enterprise. Or is it? On Uncommonly Dense, William Dembski’s group blog, we find this gem in a post by “niwrad”::

It is unimaginable that reproduction and genitals arose by Darwinian evolution (that is for random mutations and natural selection). First, as a matter of principle: evolution needs reproduction; without reproduction no evolution. Therefore how can reproduction be the effect of evolution if evolution is an effect of reproduction? It’s an impossible causality inversion. Second, for a technical reason: how could the male organs arise independently from the female organs given the cCSI they share? In fact the Darwinian processes work in the single individual. They are blind and unaware of the processes running in other individuals. Random mutations that happen in a genome have nothing to do with the mutations in another one.

”.… Darwinian processes work in the single individual”? It’s hard to conceive of the level of ignorance necessary to make the argument in that post. Apparently the notion of “coevolution” is foreign to the UD poster. But then, it only yields 186,000 hits on Google Scholar.

It’s fun to see UD in bed with Ray Comfort. Somehow I think they were made for each other. And I don’t think it was coevolution: It’s a straight lineage, ancestor to descendant.

How to do ID: (1) Find a shark. (2) Jump it.

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Denyse O’Leary, she of the multiple blogs and little reliable knowledge of evolution, is offering a prize for the original code for Dawkins’ cumulative selection demonstration program (‘METHINKS …”), described in The Blind Watchmaker, originally published in 1986. The winner actually gets to choose between two prizes, a copy of Stephen Meyer’s new elaboration of the standard ID argument from ignorance, Signature in the Cell, or a copy of Dawkins’ forthcoming The Greatest Show on Earth. (Actually, for the latter prize, O’Leary says she will ask Dawkins’ publicist to provide the prize. Strange to offer a prize she can’t herself deliver.)

The comment thread is strangely reminiscent of the recent “birther” rhetoric in the U.S. A commenter called “kibitzer” replicates the birther script almost flawlessly. For example

It is simply unconscionable that over 20 years after the program has been out and used to argue for Darwinism, Dawkins still has not made this code publicly available.

and

But the program has been much discussed on the Internet in the last decade. So where is the code?

and

Then provide the original code. Repeat after me: WE WANT TO SEE THE ORIGINAL CODE, WE WANT TO SEE THE ORIGINAL CODE, WE WANT TO SEE THE ORIGINAL CODE …

and

Of course, as programs go, Dawkins’ WEASEL is trivial and it’s easy enough to reconstruct something that’s close to it. But given the controversy surrounding it, let’s see the original program. Why is that so difficult?

and

We’re all beating our gums. Please, let’s see the original code. Why is that so much to ask? To paraphrase Ben Stein, Does anyone have it? Anyone?

Controversy? Only in the fevered imagination of Bill Dembski, who has now infected Robert Marks.

Hat tip to Glenn Branch.

The designer’s identity solved: It’s Pixies!

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In BBC blog comments I find this:

Let me repeat it for you, because you seem to be determined to misunderstand. NO-ONE is a priori excluding the presence of some sort of Primary Intelligent Cosmic Creator (PICC, pronounced “pixie”). There is no need to either include or exclude such a beastie; the only way of addressing that question is NOT by cod philosophy, but by scientific evidence.

I love the British way with words.

Hat tip to Heliopolitan, who coined the phrase.

Charles Pierce on Ham’s Creation Museum.

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Video of Charles Pierce, author of Idiot America: How Stupidity Became a Virtue in the Land of the Free, commenting on the Creationism Museum at Netroots Nation. Pull quote:

It’s a simulacrum of a museum.

Hat tip to Burt Humburg.

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